BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015E08LP1|AL426862
(990 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1369 1826 0.0
>3x_Contig1369
Length = 7461
Score = 1826 bits (916), Expect = 0.0
Identities = 977/996 (98%), Gaps = 7/996 (0%)
Strand = Plus / Minus
Query: 1 gatccgtataactaattggtggtaccaacggtgtggagcctdtaatgccgccttgttctg 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5664 gatccgtataactaattggtggtaccaacggtgtggagcctggaatgccgccttgttctg 5605
Query: 61 ggtacgagaaacaatccaccataatatgcggtgaagctacgtcgatgtacttttctatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5604 ggtacgagaaacaatccaccataatatgcggtgaagctacgtcgatgtacttttctatat 5545
Query: 121 cttcatgttgcttcttgtatgtggataaaagagcgggaggttcttgttttggggggtcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5544 cttcatgttgcttcttgtatgtggataaaagagcgggaggttcttgttttggggggtcct 5485
Query: 181 ggtccggaataggaggagaaatagggcgcgaaggttccaccattggggactgaactgcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5484 ggtccggaataggaggagaaatagggcgcgaaggttccaccattggggactgaactgcca 5425
Query: 241 taggagtgggttctgacgtcactataggagaagctgggtttatatttgccgtggtattta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5424 taggagtgggttctgacgtcactataggagaagctgggtttatatttgccgtggtattta 5365
Query: 301 ccagttgagcaggcatgttattttgtacaagtggttgcgaas-tgctgctactggtgatt 359
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5364 ccagttgagcaggcatgttattttgtacaagtggttgcgaagctgctgctactggtgatt 5305
Query: 360 ccaccttaccctttttgggttgacgaaccttctgtactggtttcttcacgccttggcgta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5304 ccaccttaccctttttgggttgacgaaccttctgtactggtttcttcacgccttggcgta 5245
Query: 420 cctgaggcgaaas-ttctgctgcggtacattattctgttgttgttgttgttgttgttgtt 478
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5244 cctgaggcgaaagcttctgctgcggtacattattctgttgttgttgttgttgttgttgtt 5185
Query: 479 gttgtactggaggttgcatctgctggccagcattatgagcttgtaaatcggcactcaacg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5184 gttgtactggaggttgcatctgctggccagcattatgagcttgtaaatcggcactcaacg 5125
Query: 539 ccagtagaatggatttgaaatccagtaaattggtcaaagaccgatcaatgaccatcataa 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5124 ccagtagaatggatttgaaatccagtaaattggtcaaagaccgatcaatgaccatcataa 5065
Query: 599 tctctggtggtacgaccatgtggttagccatcatcttaagagattggatctgtgccttca 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5064 tctctggtggtacgaccatgtggttagccatcatcttaagagattggatctgtgccttca 5005
Query: 659 acaagagcgactgttcatctgtgaacaaagaccgtgatgatgacgcgttattattattat 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5004 acaagagcgactgttcatctgtgaacaaagaccgtgatgatgacgcgttattattattat 4945
Query: 719 tattattattagamttagaattagaattagaattggtgctagctggcgtattcactccta 778
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4944 tattattattagaattagaattagaattagaattggtgctagctggcgtattcactccta 4885
Query: 779 ctgttagaccagaagccggcgcgatcggctgaggtcctacctgtggtgacatatgtggtg 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4884 ctgttagaccagaagccggcgcgatcggctgaggtcctacctgtggtgacatatgtggtg 4825
Query: 839 gtggtaccgctgttgctgctacagggcccataccattactgccaggggtataagcagacg 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4824 gtggtaccgctgttgctgctacagggcccataccattactgccaggggtataagcagacg 4765
Query: 899 gakyggttatgttattcggcgamaaccta---agctgctgctgctgttgttgca-tctgc 954
|| | ||||||||||||||| | || | |||||||||||||||||||||| |||||
Sbjct: 4764 gagtcggtatgttattcggcga-agccgaactagctgctgctgctgttgttgcattctgc 4706
Query: 955 aattgctgcygctgctgttgttgttgttgttgttgt 990
||||||||| ||||||||||||||||||||||||||
Sbjct: 4705 aattgctgctgctgctgttgttgttgttgttgttgt 4670
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,565
Number of Sequences: 1807
Number of extensions: 10565
Number of successful extensions: 1739
Number of sequences better than 1.0e-20: 1
length of query: 990
length of database: 10,358,551
effective HSP length: 16
effective length of query: 974
effective length of database: 10,329,639
effective search space: 10061068386
effective search space used: 10061068386
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)